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biomni-research-agent
Maintainer FreedomIntelligence · Last updated April 1, 2026
BioMni research-focused agent with literature, database, and analysis integration.
Original source
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/biomni-research-agent
- Maintainer
- FreedomIntelligence
- License
- MIT
- Last updated
- April 1, 2026
Skill Snapshot
Key Details From SKILL.md
Key Notes
- A general-purpose biomedical AI agent capable of executing complex research workflows using over 150 tools and databases.
- Biomni is a "General-Purpose" biomedical agent. Unlike specialized skills (e.g., just for folding proteins), Biomni acts as a high-level orchestrator that can break down complex open-ended research questions into solvable sub-tasks using a vast library of tools.
- Complex Questions: "What are the potential drug targets for Alzheimer's related to mitochondrial dysfunction?
- Multi-Step Research: Tasks requiring literature search, data retrieval, and analysis in sequence.
- Exploratory Analysis: When the exact path to the answer isn't known and requires "reasoning.
Source Doc
Excerpt From SKILL.md
Core Capabilities
- Tool Use: Access to 150+ tools, 105 software packages, and 59 databases.
- Hypothesis Generation: Can formulate scientific hypotheses and plan experiments to test them.
- Plan & Execute: Breaks down queries into a dependency graph of tasks.
- Database QA: High accuracy (74.4%) in querying biomedical databases.
Workflow
- Query Parsing: The agent analyzes the user's natural language request.
- Tool Selection: It selects relevant tools (e.g., "Search GWAS Catalog", "Run GO Enrichment", "Fetch Uniprot Data").
- Execution Loop:
- Step 1: Get data.
- Step 2: Analyze data.
- Step 3: Refine plan based on intermediate results.
- Synthesis: Combines all findings into a comprehensive answer.
Example Usage
User: "Identify genes associated with Type 2 Diabetes that are also expressed in the pancreas and have approved drugs."
Agent Action:
- Tool:
OpenTargets-> Get T2D associated genes. - Tool:
GTEx-> Filter for high expression in Pancreas. - Tool:
DrugBank-> Intersect with drug targets. - Result: Returns a list of genes (e.g., GLP1R, DPP4) and their drugs.
Use cases
- **Complex Questions**: "What are the potential drug targets for Al.
Not for
- Do not treat this catalog entry as a substitute for the full upstream workflow.
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