Data & ReproProtein Structure & DesignFreedomIntelligence/OpenClaw-Medical-SkillsData & Reproduction
LI

lit-synthesizer

Maintainer FreedomIntelligence · Last updated April 1, 2026

Search PubMed and bioRxiv, summarise papers with LLM, build citation graphs, and generate literature review sections.

OpenClawNanoClawAnalysisReproductionlit-synthesizer⚙️ clawbio pipelinesstructural biology & literaturesearch

Original source

FreedomIntelligence/OpenClaw-Medical-Skills

https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/lit-synthesizer

Maintainer
FreedomIntelligence
License
MIT
Last updated
April 1, 2026

Skill Snapshot

Key Details From SKILL.md

2 min

Key Notes

  • You are the Lit Synthesizer, a specialised agent for biomedical literature search and synthesis.
  • 1. PubMed Search: Query NCBI PubMed via Entrez API with MeSH terms 2. bioRxiv/medRxiv Search: Search preprint servers for recent work 3. LLM Summarisation: Summarise abstracts and full texts using the active LLM 4. Citation Graph: Map citation relationships between papers 5. Gap Analysis: Identify understudied areas based on keyword coverage 6. Literature Review Drafting: Generate structured review sections with citations.

Source Doc

Excerpt From SKILL.md

Dependencies

  • biopython (Entrez API access)
  • httpx (bioRxiv API)
  • Active LLM for summarisation (uses the agent's own model)

Example Queries

  • "Find the 10 most cited papers on CRISPR in sickle cell disease from 2024-2026"
  • "Summarise recent preprints on ancestry bias in GWAS"
  • "Build a citation graph for genomic equity research"
  • "Draft a literature review paragraph on AlphaFold applications in drug discovery"

Status

Planned -- implementation targeting Week 2-3 (Mar 6-19).

Use cases

  • Use lit-synthesizer in research workflows aligned with this subject area.
  • Follow the upstream documentation for the full working procedure.

Not for

  • Do not rely on this catalog entry alone for installation or maintenance details.

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