IN
Automation
instrument-data-to-allotrope
Convert laboratory instrument output files (PDF, CSV, Excel, TXT) to Allotrope Simple Model (ASM) JSON format or flattened 2D CSV. Use this…
FreedomIntelligence/OpenClaw-Medical-SkillsView
Automation
OP
opentrons-protocol-agent
Maintainer FreedomIntelligence · Last updated April 1, 2026
Opentrons liquid handler protocol design for automated lab workflows.
Original source
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/opentrons-protocol-agent
- Maintainer
- FreedomIntelligence
- License
- MIT
- Last updated
- April 1, 2026
Skill Snapshot
Key Details From SKILL.md
Key Notes
- The Opentrons Protocol Agent bridges the gap between experimental design and physical execution by translating instructions into Opentrons Python API scripts.
- python3 -m opentrons.simulate generated_protocol.py.
Source Doc
Excerpt From SKILL.md
When to Use This Skill
- When you need to automate a liquid handling task (PCR prep, ELISA, serial dilution).
- When you have a text description of a lab protocol and need code for the robot.
- To validate if a requested protocol is feasible with available labware.
Core Capabilities
- Protocol Generation: Creates valid
.pyfiles for OT-2/Flex. - Labware Validation: Checks compatibility of plates and tipracks.
- Volume Calculation: Automates liquid transfer math (e.g., dilution factors).
Workflow
- Describe: Provide the experiment details (source, destination, volumes).
- Generate: The agent uses the
opentrons_protocol_template.pyor internal logic to draft the script. - Review: The user (or a simulator agent) reviews the code for safety.
Use cases
- When you need to automate a liquid handling task (PCR prep, ELISA, serial dilution).
- When you have a text description of a lab protocol and need code for the robot.
- To validate if a requested protocol is feasible with available labware.
Not for
- Do not rely on this catalog entry alone for installation or maintenance details.
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