AutomationResearch InfrastructureFreedomIntelligence/OpenClaw-Medical-SkillsData & Reproduction

spatial-domains

Maintainer FreedomIntelligence · Last updated April 1, 2026

spatial-domains.

OpenClawNanoClawAnalysisReproductionspatial-domainsopenclaw medical skillsadditional scientific toolsspatial

Original source

FreedomIntelligence/OpenClaw-Medical-Skills

https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/spatial-domains

Maintainer: FreedomIntelligence
License: MIT
Last updated: April 1, 2026

Skill Snapshot

Key Details From SKILL.md

2 min

Key Notes

Identify spatial domains and tissue regions by combining expression and spatial information.
sc.pp.neighbors(adata, n_neighbors=15, n_pcs=30) sc.tl.leiden(adata, resolution=0.5, key_added='leiden').

Source Doc

Excerpt From SKILL.md

Visualize on tissue

sq.pl.spatial_scatter(adata, color='leiden', size=1.3)


## Build spatial neighbors

sq.gr.spatial_neighbors(adata, coord_type='generic', n_neighs=6)

## Run Leiden on spatial graph

sc.tl.leiden(adata, resolution=0.5, key_added='spatial_leiden', neighbors_key='spatial_neighbors')

sq.pl.spatial_scatter(adata, color='spatial_leiden', size=1.3)