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Data & ReproScientific VisualizationFreedomIntelligence/OpenClaw-Medical-SkillsData & Reproduction
SP

spatial-visualization

Maintainer FreedomIntelligence · Last updated April 1, 2026

spatial-visualization.

OpenClawNanoClawAnalysisWritingspatial-visualizationopenclaw medical skillsadditional scientific toolsspatial

Original source

FreedomIntelligence/OpenClaw-Medical-Skills

https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/spatial-visualization

Maintainer
FreedomIntelligence
License
MIT
Last updated
April 1, 2026

Skill Snapshot

Key Details From SKILL.md

2 min

Key Notes

  • Create visualizations for spatial transcriptomics data.
  • sq.pl.spatial_scatter(adata, color='total_counts', size=1.3).

Source Doc

Excerpt From SKILL.md

Multiple variables

sq.pl.spatial_scatter(adata, color=['total_counts', 'n_genes_by_counts'], ncols=2)


## Scanpy's spatial plot

sc.pl.spatial(adata, color='leiden', spot_size=1.5)

## Multiple genes

sc.pl.spatial(adata, color=['GENE1', 'GENE2', 'GENE3'], ncols=3)

Use cases

  • Use spatial-visualization to prepare publication-quality figures.
  • Apply spatial-visualization when results need clear visual communication.

Not for

  • Do not rely on this catalog entry alone for installation or maintenance details.

Upstream Related Skills

  • spatial-data-io - Load spatial data
  • spatial-statistics - Compute statistics to visualize
  • single-cell/clustering - Generate cluster labels

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