数据与复现生物信息与基因组学FreedomIntelligence/OpenClaw-Medical-Skills数据与复现
BI

bio-machine-learning-omics-classifiers

维护者 FreedomIntelligence · 最近更新 2026年4月1日

Train classifiers on omics data: random forest, SVM, XGBoost.

OpenClawNanoClaw分析处理复现实验bio-machine-learning-omics-classifiers🧠 bioos extended suitebioos extended bioinformatics suitetrain

原始来源

FreedomIntelligence/OpenClaw-Medical-Skills

https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-machine-learning-omics-classifiers

维护者
FreedomIntelligence
许可
MIT
最近更新
2026年4月1日

技能摘要

来自 SKILL.md 的关键信息

2 min

核心说明

  • xgb = XGBClassifier( n_estimators=100,max_depth=6,learning_rate=0.1,random_state=42,# NOT seed n_jobs=-1,# NOT nthread eval_metric='logloss' )。
  • pipe = Pipeline([('scaler',StandardScaler()),('clf',xgb)]) pipe.fit(X_train,y_train)。
  • logit = Logistic回归CV( Cs=10,cv=5,penalty='l1',solver='saga',max_iter=1000,random_state=42 ) pipe = Pipeline([('scaler',StandardScaler()),('clf',logit)]) pipe.fit(X_train,y_train)。

原始文档

SKILL.md 摘录

XGBoost Classifier

from xgboost import XGBClassifier

## Logistic Regression with Regularization

```python
from sklearn.linear_model import LogisticRegressionCV

## Get selected features (nonzero coefficients)

feature_mask = logit.coef_[0] != 0
selected = X.columns[feature_mask]

适用场景

  • Use bio-machine-learning-omics-classifiers ,用于 genomics 、 bioinformatics workflows。
  • Apply bio-machine-learning-omics-classifiers to sequencing,variant,或 omics analysis tasks。

不适用场景

  • Do not rely on this catalog entry alone ,用于 installation 或 maintenance details。

上游相关技能

  • machine-learning/model-validation - Proper model evaluation
  • machine-learning/prediction-explanation - Explain predictions with SHAP
  • machine-learning/biomarker-discovery - Reduce features before modeling

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