AG
数据与复现
agent-browser
Browse the web for any task — research topics, read articles, interact with web apps, fill forms, take screenshots, extr…
FreedomIntelligence/OpenClaw-Medical-Skills查看
数据与复现
BI
bio-read-sequences
维护者 FreedomIntelligence · 最近更新 2026年4月1日
Read biological sequence files (FASTA, FASTQ, GenBank, EMBL, ABI, SFF) using Biopython Bio.SeqIO. Use when parsing sequence files, iterating multi-sequence files, random access to large files, or high-performance parsing.
原始来源
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-read-sequences
- 维护者
- FreedomIntelligence
- 许可
- MIT
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- Python：SeqIO.parse() 或 SeqIO.read() (BioPython)。
- R：readDNAStringSet() 或 readAAStringSet() (Biostrings)。
- Read biological sequence data ，面向 files ，使用 Biopython's Bio.SeqIO module。
- Read sequences ，面向 file" → Parse file into collection of SeqRecord objects ，支持 IDs，sequences，、 annotations accessible. Python：SeqIO.parse() 或 SeqIO.read() (BioPython) R：readDNAStringSet() 或 readAAStringSet() (Biostrings)。
- records = SeqIO.index_db('index.sqlite'，'large.fasta'，'fasta') seq = records['sequence_id'].seq records.close()。
原始文档
SKILL.md 摘录
SeqIO.parse() - Multiple Records
Use for files with one or more sequences. Returns an iterator of SeqRecord objects.
Important: Always specify the format explicitly as the second argument.
SeqIO.read() - Single Record
Use when file contains exactly one sequence. Raises error if zero or multiple records.
SeqIO.to_dict() - Load All Into Memory
Use for random access by record ID. Loads entire file into memory.
适用场景
- 适合在parsing sequence files，iterating multi-sequence files，random access to large files，或 high-performance parsing时使用。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
上游相关技能
- write-sequences - Write parsed sequences to new files
- filter-sequences - Filter sequences by criteria after reading
- format-conversion - Convert between formats
- compressed-files - Read gzip/bzip2/BGZF compressed sequence files
- sequence-manipulation/seq-objects - Work with parsed SeqRecord objects
- database-access - Fetch sequences from NCBI instead of local files
相关技能
相关技能
AL
数据与复现
alpha-vantage
Access 20+ years of global financial data: equities, options, forex, crypto, commodities, economic indicators, and 50+ t…
K-Dense-AI/claude-scientific-skills查看
BI
Filter alignments by flag, quality, region, or paired status.
FreedomIntelligence/OpenClaw-Medical-Skills查看
BI
Index BAM/CRAM files with samtools index for random access.
FreedomIntelligence/OpenClaw-Medical-Skills查看