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数据与复现生物信息与基因组学FreedomIntelligence/OpenClaw-Medical-Skills数据与复现
BI

bio-seq-objects

维护者 FreedomIntelligence · 最近更新 2026年4月1日

Work with BioPython sequence objects: SeqRecord, features, annotations.

OpenClawNanoClaw分析处理复现实验bio-seq-objects🧠 bioos extended suitebioos extended bioinformatics suitework

原始来源

FreedomIntelligence/OpenClaw-Medical-Skills

https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-seq-objects

维护者
FreedomIntelligence
许可
MIT
最近更新
2026年4月1日

技能摘要

来自 SKILL.md 的关键信息

2 min

核心说明

  • 创建 、 manipulate biological sequence objects ，使用 Biopython。
  • rc_record = record.reverse_complement(id='gene1_rc'，description='reverse complement')。

原始文档

SKILL.md 摘录

Seq - Immutable Sequence

The basic sequence object. Immutable like Python strings.

Seq objects support string-like operations:

MutableSeq - Mutable Sequence

For in-place modifications when performance matters.

Convert between types:

SeqRecord - Annotated Sequence

Sequence with metadata for file I/O and analysis.

SeqRecord attributes:

适用场景

  • Use bio-seq-objects ，用于 genomics 、 bioinformatics workflows。
  • Apply bio-seq-objects to sequencing，variant，或 omics analysis tasks。

不适用场景

  • Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。

上游相关技能

  • sequence-io/read-sequences - Parse files to get SeqRecord objects
  • sequence-io/write-sequences - Write SeqRecord objects to files
  • transcription-translation - Transform Seq objects (DNA to protein)
  • reverse-complement - Get reverse complement of Seq
  • sequence-slicing - Slice and extract from Seq/SeqRecord
  • database-access/entrez-fetch - Fetch sequences from NCBI as SeqRecords

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