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数据与复现
BI
bio-sequence-slicing
维护者 FreedomIntelligence · 最近更新 2026年4月1日
Slice, extract, and manipulate subsequences from FASTA/FASTQ.
原始来源
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/bio-sequence-slicing
- 维护者
- FreedomIntelligence
- 许可
- MIT
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- 提取，slice，、 concatenate sequences ，使用 Biopython's Seq objects。
原始文档
SKILL.md 摘录
Slicing (Extract Region)
Note: Slicing returns a Seq object, not a string.
Concatenation
Can also concatenate with strings:
Extract with 1-Based Coordinates
Biology often uses 1-based coordinates. Convert to 0-based:
适用场景
- Use bio-sequence-slicing ，用于 genomics 、 bioinformatics workflows。
- Apply bio-sequence-slicing to sequencing，variant，或 omics analysis tasks。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
上游相关技能
- seq-objects - Create Seq and SeqRecord objects
- sequence-io/read-sequences - Parse GenBank files with features to extract
- transcription-translation - Translate extracted CDS regions
- alignment-files - Extract sequences from BAM using samtools fasta/fastq
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