AN
数据与复现
AnnData
AnnData is a Python package for handling annotated data matrices, storing experimental measurements (X) alongside observ…
K-Dense-AI/claude-scientific-skills查看
数据与复现
CE
Cellxgene Census
维护者 K-Dense Inc. · 最近更新 2026年4月1日
The C.
原始来源
K-Dense-AI/claude-scientific-skills
https://github.com/K-Dense-AI/claude-scientific-skills/tree/main/scientific-skills/cellxgene-census
- 维护者
- K-Dense Inc.
- 许可
- Unknown
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- 61+ million cells ，面向 human 、 mouse。
- Standardized metadata (cell types，tissues，diseases，donors)。
- Raw gene expression matrices。
- Pre-calculated embeddings 、 statistics。
- Integration ，支持 PyTorch，scanpy，、 other analysis tools。
原始文档
SKILL.md 摘录
When to Use This Skill
This skill should be used when:
- Querying single-cell expression data by cell type, tissue, or disease
- Exploring available single-cell datasets and metadata
- Training machine learning models on single-cell data
- Performing large-scale cross-dataset analyses
- Integrating Census data with scanpy or other analysis frameworks
- Computing statistics across millions of cells
- Accessing pre-calculated embeddings or model predictions
Installation and Setup
Install the Census API:
For machine learning workflows, install additional dependencies:
1. Opening the Census
Always use the context manager to ensure proper resource cleanup:
import cellxgene_census
适用场景
- Querying single-cell expression data by cell type，tissue，或 disease。
- Exploring available single-cell 数据集s 、 metadata。
- Training 机器学习 models on single-cell data。
- Performing large-scale cross-数据集 analyses。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
相关技能
相关技能
AR
数据与复现
Arboreto
Arboreto is a computational library for inferring gene regulatory networks (GRNs) from gene expression data using parall…
K-Dense-AI/claude-scientific-skills查看
Detect and remove doublets (multiple cells captured in one droplet) from single-cell RNA-seq data. Uses Scrublet (Python…
FreedomIntelligence/OpenClaw-Medical-Skills查看
Reconstruct cell lineage trees from CRISPR barcode tracing or mitochondrial mutations. Use when studying clonal dynamics…
FreedomIntelligence/OpenClaw-Medical-Skills查看