AN
数据与复现
AnnData
AnnData is a Python package for handling annotated data matrices, storing experimental measurements (X) alongside observ…
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数据与复现
CO
compbioagent-explorer
维护者 FreedomIntelligence · 最近更新 2026年4月1日
Computational biology exploration agent for multi-omics dataset analysis.
原始来源
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/compbioagent-explorer
- 维护者
- FreedomIntelligence
- 许可
- MIT
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- LLM-powered web application ，用于 single-cell RNA-seq data exploration，integrating ，支持 CellDepot 、 Cellxgene VIP。
- Interactive Exploration：When you need to visually explore 数据集 without writing code。
- Hypothesis Generation：Quickly checking expression of specific markers across clusters。
- Sharing：Presenting data to non-computational collaborators。
- Interactive Exploration：When you need to visually explore 数据集 without writing code. Hypothesis Generation：Quickly checking expression of specific markers across clusters. * Sharing：Presenting data to non-computational collaborators。
原始文档
SKILL.md 摘录
Core Capabilities
- Natural Language Querying: "Show me the expression of TP53 in the B-cell cluster."
- Cellxgene Integration: Leverages robust visualization tools.
- Data Integration: Connects with CellDepot for dataset retrieval.
Workflow
- Setup:
pip install compbioagent. - Launch:
compbioagent start --data ./data.h5ad. - Interact: Open the local URL (e.g., http://localhost:8050) and chat with the agent to generate plots.
Example Usage
User: "Launch the explorer for my kidney dataset."
Agent Action:
适用场景
- Use compbioagent-explorer ，用于 single-cell 或 spatial omics analysis。
- Apply compbioagent-explorer to 聚类，integration，或 trajectory workflows。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
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