SCI Skills

CN Directory
数据与复现蛋白结构与设计FreedomIntelligence/OpenClaw-Medical-Skills数据与复现
FO

foldseek

维护者 FreedomIntelligence · 最近更新 2026年4月1日

Structure similarity search with Foldseek. Use this skill when: (1) Finding similar structures in PDB/AFDB databases, (2) Structural homology search, (3) Database queries by 3D structure, (4) Finding remote homologs not detected by sequence, (5) Clustering structures by similarity. For sequence similarity, use uniprot BLAST. For structure prediction, use chai or boltz.

OpenClawNanoClaw分析处理复现实验foldseek🔬 omics & computational biologyprotein structure & designstructure

原始来源

FreedomIntelligence/OpenClaw-Medical-Skills

https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/foldseek

维护者
FreedomIntelligence
许可
MIT
最近更新
2026年4月1日

技能摘要

来自 SKILL.md 的关键信息

2 min

核心说明

  • curl -X POST "https：//search.foldseek.com/api/ticket" \ -F "[email protected]" \ -F "database[]=afdb50" \ -F "database[]=pdb100。
  • conda install -c conda-forge -c bioconda foldseek。

原始文档

SKILL.md 摘录

Prerequisites

RequirementMinimumRecommended
Python3.8+3.10
RAM8GB16GB
Disk10GB50GB (for local databases)

How to run

Note: Foldseek can run locally or via web server. No GPU required.

Search PDB

foldseek easy-search query.pdb /path/to/pdb100 results.m8 tmp/

适用场景

  • Use foldseek in 科研工作流 aligned ，支持 this subject area。
  • Follow upstream documentation ，用于 full working procedure。

不适用场景

  • Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。

相关技能

相关技能

返回目录
AD
数据与复现蛋白结构与设计

Adaptyv

Adaptyv is a cloud laboratory platform that provides automated protein testing and validation services. Submit protein s…

Claude CodeOpenClaw分析处理
K-Dense-AI/claude-scientific-skills查看
AL
数据与复现蛋白结构与设计

alphafold

Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences f…

OpenClawNanoClaw分析处理
FreedomIntelligence/OpenClaw-Medical-Skills查看
AL
数据与复现蛋白结构与设计

AlphaFold DB

AlphaFold DB is a public repository of AI-predicted 3D protein structures for over 200 million proteins, maintained by D…

Claude CodeOpenClaw分析处理
K-Dense-AI/claude-scientific-skills查看
AN
数据与复现蛋白结构与设计

antibody-design-agent

Antibody design: epitope mapping, CDR engineering, bispecific construction.

OpenClawNanoClaw分析处理
FreedomIntelligence/OpenClaw-Medical-Skills查看