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GG
gget
维护者 K-Dense Inc. · 最近更新 2026年4月1日
gget is a command-line bioinformatics tool and Python package providing unified access to 20+ genomic databases and analysis methods. Query gene information, sequence analysis, protein structures, expression data, and disease associations through a consistent interface. All gget modules work both as command-line tools and as Python functions. **Important**: The databases queried by gget are continuously updated, whi….
原始来源
K-Dense-AI/claude-scientific-skills
https://github.com/K-Dense-AI/claude-scientific-skills/tree/main/scientific-skills/gget
- 维护者
- K-Dense Inc.
- 许可
- BSD-2-Clause license
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- gget是一个command-line bioinformatics tool 、 Python package providing unified access to 20+ genomic databases 、 analysis methods. Query gene information，sequence analysis，protein structures，expression data，、 disease associations through consistent interface. All gget modules work both as command-line tools 、 as Python functions。
- Important：databases queried by gget are continuously updated，which sometimes changes their structure. gget modules are tested automatically on biweekly basis 、 updated to match new database structures when necessary。
- uv pip install --upgrade gget。
原始文档
SKILL.md 摘录
Installation
Install gget in a clean virtual environment to avoid conflicts:
## Quick Start
Basic usage pattern for all modules:
```bash
## Command-line
gget <module> [arguments] [options]
适用场景
- 可用于quick lookups：gene info，BLAST searches，AlphaFold structures，enrichment analysis。
- Use gget in 科研工作流 aligned ，支持 this subject area。
- Follow upstream documentation ，用于 full working procedure。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
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