BI
bio-chipseq-visualization：可视化 ChIP-seq data ，使用 deepTools，Gviz，、 ChIPseeker。 创建 heatmaps，profile plots，、 genome browser…
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数据与复现
LA
LatchBio Integration
维护者 K-Dense Inc. · 最近更新 2026年4月1日
LatchBio Integration：Latch是一个Python 框架 ，用于 building 、 deploying bioinformatics workflows as serverless pipelines。 Built on Flyte，create workflows ，支持 @workflow/@task decorators，manage cloud data ，支持 LatchFile/LatchDir，configure resources，、 integrate Nextflow/Snakemake pipelines。
原始来源
K-Dense-AI/claude-scientific-skills
https://github.com/K-Dense-AI/claude-scientific-skills/tree/main/scientific-skills/latchbio-integration
- 维护者
- K-Dense Inc.
- 许可
- Unknown
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- Latch是一个Python 框架 ，用于 building 、 deploying bioinformatics workflows as serverless pipelines. Built on Flyte，create workflows ，支持 @workflow/@task decorators，manage cloud data ，支持 LatchFile/LatchDir，configure resources，、 integrate Nextflow/Snakemake pipelines。
- python3 -m uv pip install latch。
原始文档
SKILL.md 摘录
Core Capabilities
The Latch platform provides four main areas of functionality:
1. Workflow Creation and Deployment
- Define serverless workflows using Python decorators
- Support for native Python, Nextflow, and Snakemake pipelines
- Automatic containerization with Docker
- Auto-generated no-code user interfaces
- Version control and reproducibility
2. Data Management
- Cloud storage abstractions (LatchFile, LatchDir)
- Structured data organization with Registry (Projects → Tables → Records)
- Type-safe data operations with links and enums
- Automatic file transfer between local and cloud
- Glob pattern matching for file selection
适用场景
- 创建 Latch workflow ，用于 RNA-seq analysis。
- 部署 my pipeline to Latch。
- Convert my Nextflow pipeline to Latch。
- Add GPU support to my workflow。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
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