数据与复现药物发现与化学信息学K-Dense-AI/claude-scientific-skills数据与复现
RD

RDKit

维护者 K-Dense Inc. · 最近更新 2026年4月1日

RDKit is a comprehensive cheminformatics library providing Python APIs for molecular analysis and manipulation. This skill provides guidance for reading/writing molecular structures, calculating descriptors, fingerprinting, substructure searching, chemical reactions, 2D/3D coordinate generation, and molecular visuali.

Claude CodeOpenClawNanoClaw分析处理复现实验rdkitchemistrypackagecheminformatics & drug discovery

原始来源

K-Dense-AI/claude-scientific-skills

https://github.com/K-Dense-AI/claude-scientific-skills/tree/main/scientific-skills/rdkit

维护者
K-Dense Inc.
许可
BSD-3-Clause license
最近更新
2026年4月1日

技能摘要

来自 SKILL.md 的关键信息

2 min

核心说明

  • RDKit是一个comprehensive cheminformatics 库 providing Python APIs ,用于 molecular analysis 、 manipulation. This skill provides guidance ,用于 reading/writing molecular structures,calculating descriptors,fingerprinting,substructure searching,chemical reactions,2D/3D coordinate generation,、 molecular visualization. Use this skill ,用于 drug discovery,computational chemistry,、 cheminformatics research tasks。
  • mol = Chem.MolFromSmiles('Cc1ccccc1') # Returns Mol object 或 None。

原始文档

SKILL.md 摘录

1. Molecular I/O and Creation

Reading Molecules:

Read molecular structures from various formats:

from rdkit import Chem

## From MOL files

mol = Chem.MolFromMolFile('path/to/file.mol')

## From MOL blocks (string data)

mol = Chem.MolFromMolBlock(mol_block_string)

适用场景

  • Use RDKit ,用于 medicinal chemistry 、 drug-discovery work。
  • Apply RDKit to compound,target,或 screening workflows。
  • Use rdkit ,用于 medicinal chemistry 、 drug-discovery work。
  • Apply rdkit to compound,target,或 screening workflows。

不适用场景

  • Do not rely on this catalog entry alone ,用于 installation 或 maintenance details。

相关技能

相关技能

返回目录
BI
数据与复现药物发现与化学信息学

bio-clinical-databases-hla-typing

Call HLA alleles from NGS data using OptiType, HLA-HD, or arcasHLA for immunogenomics applications. Use when determining…

OpenClawNanoClaw分析处理
FreedomIntelligence/OpenClaw-Medical-Skills查看
BI
数据与复现药物发现与化学信息学

bio-clinical-databases-pharmacogenomics

Query PharmGKB and CPIC for drug-gene interactions, pharmacogenomic annotations, and dosing guidelines. Use when predict…

OpenClawNanoClaw分析处理
FreedomIntelligence/OpenClaw-Medical-Skills查看
CE
数据与复现药物发现与化学信息学

cellfree-rna-agent

Cell-free RNA analysis: plasma cfRNA profiling for liquid biopsy diagnostics.

OpenClawNanoClaw分析处理
FreedomIntelligence/OpenClaw-Medical-Skills查看
CH
数据与复现药物发现与化学信息学

chematagent-drug-discovery

CheMatAgent: chemistry-aware drug design with retrosynthesis and property optimization.

OpenClawNanoClaw分析处理
FreedomIntelligence/OpenClaw-Medical-Skills查看