AN
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数据与复现
SI
single-cell-preprocessing-with-omicverse
维护者 FreedomIntelligence · 最近更新 2026年4月1日
Follow this skill when a user needs to reproduce the preprocessing workflow from the omicverse notebooks [`t_preprocess.ipynb`](../../omicverse_guide/docs/Tutorials-single/t_preprocess.ipynb), [`t_preprocess_cpu.ipynb`](../../omicverse_guide/docs/Tutorials-single/t_preprocess_cpu.ipynb), and [`t_preprocess_gpu.ipynb`](../../omicverse_guide/docs/Tutorials-single/t_preprocess_gpu.ipynb). The tutorials operate on the 1….
原始来源
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/single-preprocessing
- 维护者
- FreedomIntelligence
- 许可
- MIT
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- Follow this skill when user needs to reproduce preprocessing workflow ，面向 omicverse notebooks t_preprocess.ipynb，t_preprocess_cpu.ipynb，、 t_preprocess_gpu.ipynb. tutorials operate on 10x PBMC3k 数据集 、 cover QC filtering，normalisation，highly variable gene (HVG) detection，dimensionality reduction，、 downstream embeddings。
- if 'batch' not in adata.obs.columns：adata.obs['batch'] = 'batch_1' # Default single batch。
原始文档
SKILL.md 摘录
Overview
Follow this skill when a user needs to reproduce the preprocessing workflow from the omicverse notebooks t_preprocess.ipynb, t_preprocess_cpu.ipynb, and t_preprocess_gpu.ipynb. The tutorials operate on the 10x PBMC3k dataset and cover QC filtering, normalisation, highly variable gene (HVG) detection, dimensionality reduction, and downstream embeddings.
适用场景
- Use single-cell-preprocessing-，支持-omicverse ，用于 single-cell 或 spatial omics analysis。
- Apply single-cell-preprocessing-，支持-omicverse to 聚类，integration，或 trajectory workflows。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
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