AD
数据与复现
Adaptyv
Adaptyv is a cloud laboratory platform that provides automated protein testing and validation services. Submit protein s…
K-Dense-AI/claude-scientific-skills查看
数据与复现
SO
solublempnn
维护者 FreedomIntelligence · 最近更新 2026年4月1日
Solubility-optimized protein sequence design using SolubleMPNN. Use this skill when: (1) Designing for E. coli expression, (2) Optimizing solubility of designed proteins, (3) Reducing aggregation propensity, (4) Need high-yield expression, (5) Avoiding inclusion body formation. For standard design, use proteinmpnn. For ligand-aware design, use ligandmpnn.
原始来源
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/solublempnn
- 维护者
- FreedomIntelligence
- 许可
- MIT
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- python protein_mpnn_run.py \ --pdb_path backbone.pdb \ --out_folder output/ \ --num_seq_per_target 16 \ --sampling_temp "0.1" \ --model_name "v_48_020" # Soluble model。
原始文档
SKILL.md 摘录
How to run
First time? See Installation Guide to set up Modal and biomodals.
Option 1: Modal (recommended)
SolubleMPNN uses the ProteinMPNN Modal wrapper with soluble model:
GPU: T4 (16GB) | Timeout: 600s default
Option 2: Local installation
git clone https://github.com/dauparas/ProteinMPNN.git
cd ProteinMPNN
适用场景
- Use solublempnn in 科研工作流 aligned ，支持 this subject area。
- Follow upstream documentation ，用于 full working procedure。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
相关技能
相关技能
AL
数据与复现
alphafold
Validate protein designs using AlphaFold2 structure prediction. Use this skill when: (1) Validating designed sequences f…
FreedomIntelligence/OpenClaw-Medical-Skills查看
AL
数据与复现
AlphaFold DB
AlphaFold DB is a public repository of AI-predicted 3D protein structures for over 200 million proteins, maintained by D…
K-Dense-AI/claude-scientific-skills查看
AN
Antibody design: epitope mapping, CDR engineering, bispecific construction.
FreedomIntelligence/OpenClaw-Medical-Skills查看