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tooluniverse-gwas-snp-interpretation
维护者 FreedomIntelligence · 最近更新 2026年4月1日
Interpret genetic variants (SNPs) from GWAS studies by aggregating evidence from multiple sources to provide comprehensive clinical and biological context. **Use Cases:** - "Interpret rs7903146" (TCF7L2 diabetes variant) - "What diseases is rs429358 associated with?" (APOE Al.
原始来源
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/tooluniverse-gwas-snp-interpretation
- 维护者
- FreedomIntelligence
- 许可
- MIT
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- Interpret rs7903146" (TCF7L2 diabetes variant)。
- What diseases is rs429358 associated ,支持?" (APOE Alzheimer's variant)。
- Clinical significance of rs1801133" (MTHFR variant)。
- Is rs12913832 in any fine-mapped loci?" (Eye color variant)。
- Interpret genetic variants (SNPs) ,面向 GWAS studies by aggregating evidence ,面向 multiple sources to provide comprehensive clinical 、 biological context。
原始文档
SKILL.md 摘录
GWAS Catalog (EMBL-EBI)
- SNP annotations: Functional consequences, mapped genes, population frequencies
- Associations: P-values, effect sizes, study metadata
- Coverage: 350,000+ publications, 670,000+ associations
Open Targets Genetics
- Fine-mapping: Statistical credible sets from SuSiE, FINEMAP methods
- L2G predictions: Machine learning-based gene prioritization
- Colocalization: QTL evidence for causal genes
- Coverage: UK Biobank, FinnGen, and other large cohorts
Required
rs_id(str): dbSNP rs identifier- Format: "rs" + number (e.g., "rs7903146")
- Must be valid rsID in GWAS Catalog
适用场景
- 适合在asked to interpret SNP by rsID,find disease associations ,用于 variant,assess clinical significance,或 answer questions like "What diseases is rs429358 associated ,支持?" 或 "Interpret rs7903146"时使用。
不适用场景
- Do not rely on this catalog entry alone ,用于 installation 或 maintenance details。
上游相关技能
- Gene Function Analysis: Interpret predicted causal genes
- Disease Ontology Lookup: Understand trait classifications
- PubMed Literature Search: Find original GWAS publications
- Variant Effect Prediction: Functional consequence analysis
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