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tooluniverse-gwas-study-explorer

维护者 FreedomIntelligence · 最近更新 2026年4月1日

tooluniverse-gwas-study-explorer:GWAS Study Deep Dive & Meta-Analysis skill enables comprehensive comparison of genome-wide association studies (GWAS) ,用于 same trait,meta-analysis of genetic loci across studies,、 systematic assessment of replication 、 study quality。 It integrates data ,面向 NHGRI-EBI GWAS Catalog 、 Open Targets Genetics to provide complete picture of genetic architecture of complex traits。

OpenClawNanoClaw分析处理复现实验tooluniverse-gwas-study-explorer🏥 medical & clinicalmedical toolscompare

原始来源

FreedomIntelligence/OpenClaw-Medical-Skills

https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/tooluniverse-gwas-study-explorer

维护者
FreedomIntelligence
许可
MIT
最近更新
2026年4月1日

技能摘要

来自 SKILL.md 的关键信息

2 min

核心说明

  • 比较 GWAS studies,perform meta-analyses,、 assess replication across cohorts。
  • GWAS Study Deep Dive & Meta-Analysis skill enables comprehensive comparison of genome-wide association studies (GWAS) ,用于 same trait,meta-analysis of genetic loci across studies,、 systematic assessment of replication 、 study quality. It integrates data ,面向 NHGRI-EBI GWAS Catalog 、 Open Targets Genetics to provide complete picture of genetic architecture of complex traits。

原始文档

SKILL.md 摘录

Key Capabilities

  1. Study Comparison: Compare all GWAS studies for a trait, assessing sample sizes, ancestries, and platforms
  2. Meta-Analysis: Aggregate effect sizes across studies and calculate heterogeneity statistics
  3. Replication Assessment: Identify replicated vs novel findings across discovery and replication cohorts
  4. Quality Evaluation: Assess statistical power, ancestry diversity, and data availability

1. Comprehensive Trait Analysis

Scenario: "I want to understand all available GWAS data for type 2 diabetes"

Workflow:

  • Search for all T2D studies in GWAS Catalog
  • Filter by sample size and ancestry
  • Extract top associations from each study
  • Identify consistently replicated loci
  • Assess ancestry-specific effects

Outcome: Complete landscape of T2D genetics with replicated findings and population-specific signals

2. Locus-Specific Meta-Analysis

Scenario: "Is the TCF7L2 association with T2D consistent across all studies?"

Workflow:

  • Retrieve all TCF7L2 (rs7903146) associations for T2D
  • Calculate combined effect size and p-value
  • Assess heterogeneity (I² statistic)
  • Generate forest plot data
  • Interpret heterogeneity level

Outcome: Quantitative assessment of effect size consistency with heterogeneity interpretation

适用场景

  • 适合在comparing GWAS studies ,用于 trait,performing meta-analysis of genetic loci,assessing replication across cohorts,或 exploring genetic architecture of complex diseases时使用。

不适用场景

  • Do not rely on this catalog entry alone ,用于 installation 或 maintenance details。

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