BI
Specialized lipidomics analysis for lipid identification, quantification, and pathway interpretation. Covers LC-MS lipid…
FreedomIntelligence/OpenClaw-Medical-Skills查看
数据与复现
TO
tooluniverse-metabolomics
维护者 FreedomIntelligence · 最近更新 2026年4月1日
Comprehensive metabolomics research skill for identifying metabolites, analyzing studies, and searching metabolomics databases. Integrates HMDB (220k+ metabolites), MetaboLights, Metabolomics Workbench, and PubChem. Use when asked to identify or annotate metabolites (HMDB IDs, chemical properties, pathways), retrieve metabolomics study information from MetaboLights (MTBLS*) or Metabolomics Workbench (ST*), search fo….
原始来源
FreedomIntelligence/OpenClaw-Medical-Skills
https://github.com/FreedomIntelligence/OpenClaw-Medical-Skills/tree/main/skills/tooluniverse-metabolomics
- 维护者
- FreedomIntelligence
- 许可
- MIT
- 最近更新
- 2026年4月1日
技能摘要
来自 SKILL.md 的关键信息
核心说明
- Comprehensive metabolomics research skill that identifies metabolites，analyzes studies，、 searches metabolomics databases. Generates structured research reports ，支持 annotated metabolite information，study details，、 database statistics。
- Identify 或 annotate metabolites (HMDB IDs，chemical properties，pathways)。
- 获取 metabolomics study information ，面向 MetaboLights 或 Metabolomics Workbench。
- 检索 ，用于 metabolomics studies by keywords 或 disease。
- 分析 metabolite profiles 或 数据集s。
原始文档
SKILL.md 摘录
Databases Covered
Primary metabolite databases:
- HMDB (Human Metabolome Database): 220,000+ metabolites with structures, pathways, and biological roles
- MetaboLights: Public metabolomics repository with thousands of studies
- Metabolomics Workbench: NIH Common Fund metabolomics data repository
- PubChem: Chemical properties and bioactivity data (fallback)
Research Workflow
The skill executes a 4-phase analysis pipeline:
Phase 1: Metabolite Identification & Annotation
For each metabolite in the input list:
- Search HMDB by metabolite name
- Retrieve HMDB ID, chemical formula, molecular weight
- Get detailed metabolite information (description, pathways)
- Fallback to PubChem for CID and chemical properties if HMDB unavailable
适用场景
- 适合在asked to identify 或 annotate metabolites (HMDB IDs，chemical properties，pathways)，retrieve metabolomics study information ，面向 MetaboLights (MTBLS*) 或 Metabolomics Workbench (ST*)，search ，用于 studies by keywords 或 disease，或 generate comprehensive metabolomics research reports时使用。
不适用场景
- Do not rely on this catalog entry alone ，用于 installation 或 maintenance details。
相关技能
相关技能
Metabolite identification from m/z and retention time. Covers database matching, MS/MS spectral matching, and confidence…
FreedomIntelligence/OpenClaw-Medical-Skills查看
MS-DIAL-based metabolomics preprocessing as alternative to XCMS. Covers peak detection, alignment, annotation, and expor…
FreedomIntelligence/OpenClaw-Medical-Skills查看
Map metabolites to biological pathways using KEGG, Reactome, and MetaboAnalyst. Perform pathway enrichment and topology…
FreedomIntelligence/OpenClaw-Medical-Skills查看