软件包生信与基因组科研包与框架

cellxgene-census

Cellxgene Census

Query the CELLxGENE Census (61M+ cells) programmatically. Use when you need expression data across tissues, diseases, or cell types from the largest curated single-cell atlas. Best for population-scale queries, reference atlas comparisons. For analyzing your own data use scanpy or scvi-tools.

这页展示的是上游仓库条目,不代表已进入 SCI Skills 精选目录。

原始路径
scientific-skills/cellxgene-census
允许工具
-
仓库版本
2.31.0
同步时间
2026年3月27日

条目说明

条目说明

The CZ CELLxGENE Census provides programmatic access to a comprehensive, versioned collection of standardized single-cell genomics data from CZ CELLxGENE Discover. This skill enables efficient querying and analysis of millions of cells across thousands of datasets.

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软件包生信与基因组

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Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.